Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Gm18733-201ENSMUST00000173950 856 ntBASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc59Q8R2N0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Gm11452-201ENSMUST00000122376 690 ntBASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc59Q8R2N0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Gm6376-201ENSMUST00000209407 580 ntBASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc59Q8R2N0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms