Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd3Q8R1N4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd3Q8R1N4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd3Q8R1N4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Nudcd3Q8R1N4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd3Q8R1N4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Gm8097-201ENSMUST00000117903 829 ntBASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nudcd3Q8R1N4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nudcd3Q8R1N4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nudcd3Q8R1N4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nudcd3Q8R1N4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms