Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Dancr-204ENSMUST00000132389 2347 ntBASIC16.61■□□□□ 0.25
Syne4Q8CII8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Gm12585-201ENSMUST00000117307 290 ntBASIC16.6■□□□□ 0.25
Syne4Q8CII8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Gm9002-201ENSMUST00000178437 499 ntBASIC16.6■□□□□ 0.25
Syne4Q8CII8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 AA619741-201ENSMUST00000195095 646 ntBASIC16.6■□□□□ 0.25
Syne4Q8CII8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Gm43630-201ENSMUST00000201550 776 ntBASIC16.6■□□□□ 0.25
Syne4Q8CII8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne4Q8CII8 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.59■□□□□ 0.25
Syne4Q8CII8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.59■□□□□ 0.25
Syne4Q8CII8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne4Q8CII8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syne4Q8CII8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syne4Q8CII8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syne4Q8CII8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Syne4Q8CII8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syne4Q8CII8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syne4Q8CII8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syne4Q8CII8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syne4Q8CII8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Gm15393-201ENSMUST00000120499 219 ntBASIC16.58■□□□□ 0.24
Syne4Q8CII8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Gm9726-201ENSMUST00000180321 678 ntBASIC16.58■□□□□ 0.24
Syne4Q8CII8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Syne4Q8CII8 Gm33320-201ENSMUST00000192232 530 ntBASIC16.58■□□□□ 0.24
Syne4Q8CII8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms