Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rbm28Q8CGC6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rbm28Q8CGC6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rbm28Q8CGC6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Rbm28Q8CGC6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rbm28Q8CGC6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Celf4-206ENSMUST00000224553 1729 ntBASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm28Q8CGC6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Gm11543-201ENSMUST00000120758 370 ntBASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Gm18737-201ENSMUST00000173594 937 ntBASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm28Q8CGC6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Gm2810-201ENSMUST00000118681 990 ntBASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm28Q8CGC6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Gm27430-201ENSMUST00000184585 107 ntBASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Gm44333-201ENSMUST00000197168 107 ntBASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms