Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Gm7284-201ENSMUST00000131667 944 ntBASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Gm6296-201ENSMUST00000222599 943 ntBASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Gm14859-201ENSMUST00000117752 357 ntBASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Gm27357-201ENSMUST00000183754 135 ntBASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lysmd4Q8CC84 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd4Q8CC84 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd4Q8CC84 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms