Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc46a2Q8CA03 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Gm27646-201ENSMUST00000183989 110 ntBASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc46a2Q8CA03 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Gm18669-201ENSMUST00000216049 778 ntBASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc46a2Q8CA03 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc46a2Q8CA03 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms