Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim9Q8C7M3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim9Q8C7M3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim9Q8C7M3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim9Q8C7M3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim9Q8C7M3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Mir3113-201ENSMUST00000175478 76 ntBASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim9Q8C7M3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim9Q8C7M3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim9Q8C7M3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim9Q8C7M3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim9Q8C7M3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim9Q8C7M3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim9Q8C7M3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim9Q8C7M3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Rpph1-201ENSMUST00000175096 319 ntBASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Gm27525-201ENSMUST00000184465 107 ntBASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim9Q8C7M3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Gm15427-201ENSMUST00000117288 531 ntBASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trim9Q8C7M3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms