Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Gm13616-201ENSMUST00000120600 222 ntBASIC16.35■□□□□ 0.21
Trim47Q8C0E3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Gm18737-201ENSMUST00000173594 937 ntBASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Gm25948-201ENSMUST00000175334 112 ntBASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim47Q8C0E3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Gm5779-201ENSMUST00000218467 910 ntBASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim47Q8C0E3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trim47Q8C0E3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim47Q8C0E3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.33■□□□□ 0.21
Trim47Q8C0E3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim47Q8C0E3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Gm13015-201ENSMUST00000118674 204 ntBASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.33■□□□□ 0.2
Trim47Q8C0E3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Gm2451-201ENSMUST00000199447 999 ntBASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Gm10290-201ENSMUST00000200451 999 ntBASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim47Q8C0E3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Gm24158-201ENSMUST00000175263 71 ntBASIC16.32■□□□□ 0.2
Trim47Q8C0E3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim47Q8C0E3 Gm7774-201ENSMUST00000200064 533 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms