Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Gm15165-201ENSMUST00000118140 502 ntBASIC13.02□□□□□ -0.33
SprnQ8BWU1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.02□□□□□ -0.33
SprnQ8BWU1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SprnQ8BWU1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.01□□□□□ -0.33
SprnQ8BWU1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.01□□□□□ -0.33
SprnQ8BWU1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 AW822252-206ENSMUST00000208904 237 ntBASIC13.01□□□□□ -0.33
SprnQ8BWU1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SprnQ8BWU1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13□□□□□ -0.33
SprnQ8BWU1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
SprnQ8BWU1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13□□□□□ -0.33
SprnQ8BWU1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13□□□□□ -0.33
SprnQ8BWU1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SprnQ8BWU1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SprnQ8BWU1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13□□□□□ -0.33
SprnQ8BWU1 Trav13-3-201ENSMUST00000117226 336 ntBASIC13□□□□□ -0.33
SprnQ8BWU1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13□□□□□ -0.33
SprnQ8BWU1 Gm6443-201ENSMUST00000203599 874 ntBASIC13□□□□□ -0.33
SprnQ8BWU1 Gm7506-201ENSMUST00000207758 815 ntBASIC13□□□□□ -0.33
SprnQ8BWU1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SprnQ8BWU1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13□□□□□ -0.33
SprnQ8BWU1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13□□□□□ -0.33
SprnQ8BWU1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SprnQ8BWU1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13□□□□□ -0.33
SprnQ8BWU1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13□□□□□ -0.33
SprnQ8BWU1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SprnQ8BWU1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.99□□□□□ -0.33
SprnQ8BWU1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SprnQ8BWU1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SprnQ8BWU1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.99□□□□□ -0.33
SprnQ8BWU1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SprnQ8BWU1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SprnQ8BWU1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms