Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Gm7787-201ENSMUST00000216858 688 ntBASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cpsf4Q8BQZ5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf4Q8BQZ5 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Celf4-206ENSMUST00000224553 1729 ntBASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4Q8BQZ5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4Q8BQZ5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms