Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.03■□□□□ -0
Sfr1Q8BP27 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.03■□□□□ -0
Sfr1Q8BP27 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Sfr1Q8BP27 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sfr1Q8BP27 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sfr1Q8BP27 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.03■□□□□ -0
Sfr1Q8BP27 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sfr1Q8BP27 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sfr1Q8BP27 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
Sfr1Q8BP27 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sfr1Q8BP27 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sfr1Q8BP27 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sfr1Q8BP27 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sfr1Q8BP27 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sfr1Q8BP27 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.02■□□□□ -0
Sfr1Q8BP27 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sfr1Q8BP27 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.02■□□□□ -0
Sfr1Q8BP27 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sfr1Q8BP27 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sfr1Q8BP27 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.02■□□□□ -0
Sfr1Q8BP27 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.02■□□□□ -0
Sfr1Q8BP27 Gm2756-201ENSMUST00000195851 400 ntBASIC15.02■□□□□ -0
Sfr1Q8BP27 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.02■□□□□ -0
Sfr1Q8BP27 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.02■□□□□ -0
Sfr1Q8BP27 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.02■□□□□ -0
Sfr1Q8BP27 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sfr1Q8BP27 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sfr1Q8BP27 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sfr1Q8BP27 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.02□□□□□ -0.01
Sfr1Q8BP27 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sfr1Q8BP27 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sfr1Q8BP27 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sfr1Q8BP27 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sfr1Q8BP27 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sfr1Q8BP27 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sfr1Q8BP27 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Sfr1Q8BP27 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.02□□□□□ -0.01
Sfr1Q8BP27 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sfr1Q8BP27 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Gm25911-201ENSMUST00000157621 56 ntBASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Gm24513-201ENSMUST00000174964 138 ntBASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sfr1Q8BP27 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sfr1Q8BP27 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sfr1Q8BP27 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sfr1Q8BP27 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sfr1Q8BP27 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sfr1Q8BP27 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sfr1Q8BP27 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sfr1Q8BP27 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms