Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn3Q8BHH8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Gm43767-201ENSMUST00000198933 381 ntBASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn3Q8BHH8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Gm14140-201ENSMUST00000119999 995 ntBASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.86□□□□□ -0.19
Clrn3Q8BHH8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms