Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim6Q8BGE7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Trim6Q8BGE7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim6Q8BGE7 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Gm13836-201ENSMUST00000121159 501 ntBASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Mir7071-201ENSMUST00000184847 69 ntBASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim6Q8BGE7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Gm7284-201ENSMUST00000131667 944 ntBASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim6Q8BGE7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Gm27357-201ENSMUST00000183754 135 ntBASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim6Q8BGE7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms