Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubp1Q811S7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ubp1Q811S7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubp1Q811S7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.56□□□□□ -0.08
Ubp1Q811S7 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.56□□□□□ -0.08
Ubp1Q811S7 Gm42790-201ENSMUST00000201268 969 ntBASIC14.56□□□□□ -0.08
Ubp1Q811S7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.56□□□□□ -0.08
Ubp1Q811S7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.56□□□□□ -0.08
Ubp1Q811S7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.56□□□□□ -0.08
Ubp1Q811S7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubp1Q811S7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Gm15427-201ENSMUST00000117288 531 ntBASIC14.55□□□□□ -0.08
Ubp1Q811S7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.55□□□□□ -0.08
Ubp1Q811S7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.55□□□□□ -0.08
Ubp1Q811S7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.55□□□□□ -0.08
Ubp1Q811S7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Ubp1Q811S7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ubp1Q811S7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubp1Q811S7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubp1Q811S7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubp1Q811S7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubp1Q811S7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubp1Q811S7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.53□□□□□ -0.08
Ubp1Q811S7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ubp1Q811S7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms