Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim50Q810I2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim50Q810I2 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.38□□□□□ -0.11
Trim50Q810I2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trim50Q810I2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim50Q810I2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim50Q810I2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim50Q810I2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim50Q810I2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim50Q810I2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim50Q810I2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim50Q810I2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim50Q810I2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim50Q810I2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim50Q810I2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trim50Q810I2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim50Q810I2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim50Q810I2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim50Q810I2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trim50Q810I2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim50Q810I2 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.37□□□□□ -0.11
Trim50Q810I2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trim50Q810I2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim50Q810I2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim50Q810I2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.36□□□□□ -0.11
Trim50Q810I2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim50Q810I2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim50Q810I2 Gm15467-201ENSMUST00000120582 445 ntBASIC14.36□□□□□ -0.11
Trim50Q810I2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim50Q810I2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim50Q810I2 Mir8117-201ENSMUST00000184773 107 ntBASIC14.36□□□□□ -0.11
Trim50Q810I2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trim50Q810I2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.36□□□□□ -0.11
Trim50Q810I2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim50Q810I2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim50Q810I2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim50Q810I2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim50Q810I2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim50Q810I2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.35□□□□□ -0.11
Trim50Q810I2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Mir3113-201ENSMUST00000175478 76 ntBASIC14.35□□□□□ -0.11
Trim50Q810I2 Gm27301-201ENSMUST00000184012 127 ntBASIC14.35□□□□□ -0.11
Trim50Q810I2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim50Q810I2 Gm44492-201ENSMUST00000197012 141 ntBASIC14.35□□□□□ -0.11
Trim50Q810I2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim50Q810I2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms