Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.32□□□□□ -0.44
Ttc28Q80XJ3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ttc28Q80XJ3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.32□□□□□ -0.44
Ttc28Q80XJ3 Gm2495-201ENSMUST00000191160 466 ntBASIC12.32□□□□□ -0.44
Ttc28Q80XJ3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ttc28Q80XJ3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ttc28Q80XJ3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ttc28Q80XJ3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Ttc28Q80XJ3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ttc28Q80XJ3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ttc28Q80XJ3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ttc28Q80XJ3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Gm4984-201ENSMUST00000115987 360 ntBASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Prob1-201ENSMUST00000097619 3021 ntBASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Gm5279-201ENSMUST00000199575 745 ntBASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ttc28Q80XJ3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Gm13464-201ENSMUST00000119418 935 ntBASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Snora78-201ENSMUST00000158630 128 ntBASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Gm45841-201ENSMUST00000207700 164 ntBASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ttc28Q80XJ3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Gm12390-201ENSMUST00000117897 397 ntBASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Gm10478-201ENSMUST00000084451 396 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms