Protein–RNA interactions for Protein: Q80U56

Avl9, Late secretory pathway protein AVL9 homolog, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Avl9Q80U56 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Avl9Q80U56 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Avl9Q80U56 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Avl9Q80U56 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Avl9Q80U56 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Avl9Q80U56 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Avl9Q80U56 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Avl9Q80U56 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Avl9Q80U56 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Avl9Q80U56 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Avl9Q80U56 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Avl9Q80U56 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Avl9Q80U56 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Avl9Q80U56 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Avl9Q80U56 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.27□□□□□ -0.13
Avl9Q80U56 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.27□□□□□ -0.13
Avl9Q80U56 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Gm27920-201ENSMUST00000183953 96 ntBASIC14.27□□□□□ -0.13
Avl9Q80U56 Gm10576-201ENSMUST00000191927 825 ntBASIC14.27□□□□□ -0.13
Avl9Q80U56 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.27□□□□□ -0.13
Avl9Q80U56 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Avl9Q80U56 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Avl9Q80U56 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Avl9Q80U56 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.26□□□□□ -0.13
Avl9Q80U56 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.26□□□□□ -0.13
Avl9Q80U56 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Avl9Q80U56 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.26□□□□□ -0.13
Avl9Q80U56 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.26□□□□□ -0.13
Avl9Q80U56 Auts2-212ENSMUST00000178555 309 ntBASIC14.26□□□□□ -0.13
Avl9Q80U56 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.26□□□□□ -0.13
Avl9Q80U56 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Avl9Q80U56 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Avl9Q80U56 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Avl9Q80U56 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Avl9Q80U56 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.25□□□□□ -0.13
Avl9Q80U56 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.25□□□□□ -0.13
Avl9Q80U56 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.25□□□□□ -0.13
Avl9Q80U56 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.25□□□□□ -0.13
Avl9Q80U56 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.25□□□□□ -0.13
Avl9Q80U56 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.25□□□□□ -0.13
Avl9Q80U56 Gm18049-201ENSMUST00000208909 581 ntBASIC14.25□□□□□ -0.13
Avl9Q80U56 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Avl9Q80U56 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Avl9Q80U56 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.25□□□□□ -0.13
Avl9Q80U56 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Avl9Q80U56 Asic1-205ENSMUST00000228185 1818 ntBASIC14.25□□□□□ -0.13
Avl9Q80U56 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Avl9Q80U56 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Avl9Q80U56 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Avl9Q80U56 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Avl9Q80U56 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Avl9Q80U56 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Avl9Q80U56 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Avl9Q80U56 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Avl9Q80U56 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Avl9Q80U56 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Avl9Q80U56 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Avl9Q80U56 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Avl9Q80U56 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Avl9Q80U56 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Avl9Q80U56 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms