Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.46■□□□□ 0.07
Prpf38bQ80SY5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Prpf38bQ80SY5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Prpf38bQ80SY5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Prpf38bQ80SY5 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.46■□□□□ 0.06
Prpf38bQ80SY5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Gm5779-201ENSMUST00000218467 910 ntBASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.45■□□□□ 0.06
Prpf38bQ80SY5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Gm37444-201ENSMUST00000193605 439 ntBASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Gm18062-201ENSMUST00000208020 547 ntBASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Gm18055-201ENSMUST00000208254 547 ntBASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf38bQ80SY5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms