Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Exosc3Q7TQK4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Exosc3Q7TQK4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm6973-201ENSMUST00000117080 721 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm24513-201ENSMUST00000174964 138 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm9726-201ENSMUST00000180321 678 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm27494-201ENSMUST00000184735 189 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm27397-201ENSMUST00000184997 107 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm2451-201ENSMUST00000199447 999 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm10290-201ENSMUST00000200451 999 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Exosc3Q7TQK4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Exosc3Q7TQK4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Exosc3Q7TQK4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Exosc3Q7TQK4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Exosc3Q7TQK4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Exosc3Q7TQK4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Exosc3Q7TQK4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Exosc3Q7TQK4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Exosc3Q7TQK4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Exosc3Q7TQK4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Exosc3Q7TQK4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms