Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx58Q6Q899 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Gm24543-201ENSMUST00000103867 82 ntBASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Gm27680-201ENSMUST00000184192 160 ntBASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.22■□□□□ 0.51
Ddx58Q6Q899 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Gm27989-201ENSMUST00000184721 107 ntBASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Gm27321-201ENSMUST00000185021 205 ntBASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Ddx58Q6Q899 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ddx58Q6Q899 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx58Q6Q899 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Mir8102-201ENSMUST00000184148 139 ntBASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Gm9063-201ENSMUST00000223299 582 ntBASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx58Q6Q899 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx58Q6Q899 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Gm6222-201ENSMUST00000120787 396 ntBASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Mir7684-201ENSMUST00000183858 60 ntBASIC18.18■□□□□ 0.5
Ddx58Q6Q899 Gm44344-201ENSMUST00000200287 129 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms