Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup98Q6PFD9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nup98Q6PFD9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Nup98Q6PFD9 Gm15957-201ENSMUST00000118893 974 ntBASIC17.14■□□□□ 0.34
Nup98Q6PFD9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.14■□□□□ 0.34
Nup98Q6PFD9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.14■□□□□ 0.34
Nup98Q6PFD9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.14■□□□□ 0.34
Nup98Q6PFD9 Gm18027-201ENSMUST00000218947 619 ntBASIC17.14■□□□□ 0.34
Nup98Q6PFD9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nup98Q6PFD9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nup98Q6PFD9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nup98Q6PFD9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup98Q6PFD9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup98Q6PFD9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Nup98Q6PFD9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.12■□□□□ 0.33
Nup98Q6PFD9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms