Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ShbQ6PD21 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ShbQ6PD21 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ShbQ6PD21 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.74■□□□□ 0.11
ShbQ6PD21 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.74■□□□□ 0.11
ShbQ6PD21 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ShbQ6PD21 Mir8109-201ENSMUST00000184375 117 ntBASIC15.74■□□□□ 0.11
ShbQ6PD21 Gm18056-201ENSMUST00000207670 568 ntBASIC15.74■□□□□ 0.11
ShbQ6PD21 Gm18061-201ENSMUST00000208350 562 ntBASIC15.74■□□□□ 0.11
ShbQ6PD21 Gm18063-201ENSMUST00000208529 568 ntBASIC15.74■□□□□ 0.11
ShbQ6PD21 Gm18052-201ENSMUST00000208750 559 ntBASIC15.74■□□□□ 0.11
ShbQ6PD21 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ShbQ6PD21 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.74■□□□□ 0.11
ShbQ6PD21 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ShbQ6PD21 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ShbQ6PD21 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.74■□□□□ 0.11
ShbQ6PD21 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ShbQ6PD21 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ShbQ6PD21 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ShbQ6PD21 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ShbQ6PD21 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.73■□□□□ 0.11
ShbQ6PD21 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ShbQ6PD21 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.73■□□□□ 0.11
ShbQ6PD21 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ShbQ6PD21 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ShbQ6PD21 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
ShbQ6PD21 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.73■□□□□ 0.11
ShbQ6PD21 Gm11524-201ENSMUST00000119349 807 ntBASIC15.73■□□□□ 0.11
ShbQ6PD21 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Gm4857-201ENSMUST00000192718 785 ntBASIC15.73■□□□□ 0.11
ShbQ6PD21 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.73■□□□□ 0.11
ShbQ6PD21 Gm18905-201ENSMUST00000205454 928 ntBASIC15.73■□□□□ 0.11
ShbQ6PD21 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Gm19309-201ENSMUST00000218295 205 ntBASIC15.73■□□□□ 0.11
ShbQ6PD21 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ShbQ6PD21 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
ShbQ6PD21 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
ShbQ6PD21 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
ShbQ6PD21 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.73■□□□□ 0.11
ShbQ6PD21 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ShbQ6PD21 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ShbQ6PD21 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.72■□□□□ 0.11
ShbQ6PD21 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.72■□□□□ 0.11
ShbQ6PD21 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
ShbQ6PD21 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.72■□□□□ 0.11
ShbQ6PD21 Gm12882-201ENSMUST00000121696 517 ntBASIC15.72■□□□□ 0.11
ShbQ6PD21 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.72■□□□□ 0.11
ShbQ6PD21 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ShbQ6PD21 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ShbQ6PD21 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.72■□□□□ 0.11
ShbQ6PD21 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
ShbQ6PD21 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShbQ6PD21 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShbQ6PD21 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ShbQ6PD21 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShbQ6PD21 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShbQ6PD21 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShbQ6PD21 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShbQ6PD21 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShbQ6PD21 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms