Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Gm7222-201ENSMUST00000117512 906 ntBASIC16.54■□□□□ 0.24
Abcf1Q6P542 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Abcf1Q6P542 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Gm6443-201ENSMUST00000203599 874 ntBASIC16.53■□□□□ 0.24
Abcf1Q6P542 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.53■□□□□ 0.24
Abcf1Q6P542 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Abcf1Q6P542 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.53■□□□□ 0.24
Abcf1Q6P542 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.52■□□□□ 0.24
Abcf1Q6P542 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.52■□□□□ 0.24
Abcf1Q6P542 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Gm8318-201ENSMUST00000182954 872 ntBASIC16.52■□□□□ 0.24
Abcf1Q6P542 Gm6550-201ENSMUST00000187574 993 ntBASIC16.52■□□□□ 0.24
Abcf1Q6P542 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Abcf1Q6P542 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcf1Q6P542 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcf1Q6P542 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcf1Q6P542 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcf1Q6P542 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcf1Q6P542 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcf1Q6P542 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.52■□□□□ 0.23
Abcf1Q6P542 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Abcf1Q6P542 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcf1Q6P542 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Abcf1Q6P542 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Abcf1Q6P542 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Abcf1Q6P542 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms