Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox19Q62249 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox19Q62249 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox19Q62249 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.6□□□□□ -0.39
Sox19Q62249 Gm15165-201ENSMUST00000118140 502 ntBASIC12.6□□□□□ -0.39
Sox19Q62249 Gm4459-201ENSMUST00000118750 468 ntBASIC12.6□□□□□ -0.39
Sox19Q62249 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox19Q62249 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.6□□□□□ -0.39
Sox19Q62249 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox19Q62249 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox19Q62249 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.6□□□□□ -0.39
Sox19Q62249 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Gm17808-201ENSMUST00000200859 894 ntBASIC12.6□□□□□ -0.39
Sox19Q62249 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.6□□□□□ -0.39
Sox19Q62249 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.6□□□□□ -0.39
Sox19Q62249 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sox19Q62249 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Sox19Q62249 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox19Q62249 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox19Q62249 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.59□□□□□ -0.39
Sox19Q62249 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sox19Q62249 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox19Q62249 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox19Q62249 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox19Q62249 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sox19Q62249 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sox19Q62249 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sox19Q62249 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox19Q62249 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sox19Q62249 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox19Q62249 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Sox19Q62249 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox19Q62249 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Sox19Q62249 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox19Q62249 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox19Q62249 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox19Q62249 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox19Q62249 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox19Q62249 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.58□□□□□ -0.4
Sox19Q62249 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox19Q62249 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox19Q62249 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox19Q62249 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms