Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Six4Q61321 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Six4Q61321 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Six4Q61321 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Six4Q61321 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Six4Q61321 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Six4Q61321 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
Six4Q61321 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Six4Q61321 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.88□□□□□ -0.03
Six4Q61321 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.88□□□□□ -0.03
Six4Q61321 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.88□□□□□ -0.03
Six4Q61321 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.88□□□□□ -0.03
Six4Q61321 Gm18057-201ENSMUST00000208220 503 ntBASIC14.88□□□□□ -0.03
Six4Q61321 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Six4Q61321 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Six4Q61321 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six4Q61321 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Six4Q61321 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.87□□□□□ -0.03
Six4Q61321 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.87□□□□□ -0.03
Six4Q61321 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Six4Q61321 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Six4Q61321 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.87□□□□□ -0.03
Six4Q61321 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.87□□□□□ -0.03
Six4Q61321 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.87□□□□□ -0.03
Six4Q61321 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.87□□□□□ -0.03
Six4Q61321 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 Gm5479-201ENSMUST00000160578 435 ntBASIC14.87□□□□□ -0.03
Six4Q61321 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 Chchd1-203ENSMUST00000224633 557 ntBASIC14.87□□□□□ -0.03
Six4Q61321 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Six4Q61321 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.87□□□□□ -0.03
Six4Q61321 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.87□□□□□ -0.03
Six4Q61321 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Six4Q61321 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.87□□□□□ -0.03
Six4Q61321 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Six4Q61321 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six4Q61321 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.86□□□□□ -0.03
Six4Q61321 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Six4Q61321 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Six4Q61321 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.86□□□□□ -0.03
Six4Q61321 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.86□□□□□ -0.03
Six4Q61321 Mir1895-201ENSMUST00000122615 79 ntBASIC14.86□□□□□ -0.03
Six4Q61321 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.86□□□□□ -0.03
Six4Q61321 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.86□□□□□ -0.03
Six4Q61321 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Six4Q61321 Gm2756-201ENSMUST00000195851 400 ntBASIC14.86□□□□□ -0.03
Six4Q61321 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.86□□□□□ -0.03
Six4Q61321 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.86□□□□□ -0.03
Six4Q61321 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six4Q61321 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.86□□□□□ -0.03
Six4Q61321 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms