Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Gm43767-201ENSMUST00000198933 381 ntBASIC17.69■□□□□ 0.42
Mre11Q61216 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Mre11Q61216 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Mre11Q61216 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mre11Q61216 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mre11Q61216 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mre11Q61216 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Mre11Q61216 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.68■□□□□ 0.42
Mre11Q61216 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.68■□□□□ 0.42
Mre11Q61216 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.68■□□□□ 0.42
Mre11Q61216 Gm8318-201ENSMUST00000182954 872 ntBASIC17.68■□□□□ 0.42
Mre11Q61216 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Mre11Q61216 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Mre11Q61216 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Mre11Q61216 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mre11Q61216 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Mre11Q61216 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.67■□□□□ 0.42
Mre11Q61216 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Mre11Q61216 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.67■□□□□ 0.42
Mre11Q61216 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Mre11Q61216 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Gm13559-201ENSMUST00000120476 863 ntBASIC17.67■□□□□ 0.42
Mre11Q61216 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.67■□□□□ 0.42
Mre11Q61216 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.67■□□□□ 0.42
Mre11Q61216 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Mre11Q61216 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.67■□□□□ 0.42
Mre11Q61216 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Mre11Q61216 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Mre11Q61216 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Mre11Q61216 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Mre11Q61216 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mre11Q61216 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Mre11Q61216 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Mre11Q61216 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC17.66■□□□□ 0.42
Mre11Q61216 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mre11Q61216 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mre11Q61216 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mre11Q61216 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mre11Q61216 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mre11Q61216 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms