Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.07□□□□□ -0.16
Nr1h4Q60641 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.07□□□□□ -0.16
Nr1h4Q60641 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.06□□□□□ -0.16
Nr1h4Q60641 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Gm7284-201ENSMUST00000131667 944 ntBASIC14.06□□□□□ -0.16
Nr1h4Q60641 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nr1h4Q60641 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Gm18489-201ENSMUST00000172565 551 ntBASIC14.05□□□□□ -0.16
Nr1h4Q60641 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.05□□□□□ -0.16
Nr1h4Q60641 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nr1h4Q60641 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms