Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Satb1Q60611 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Satb1Q60611 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Satb1Q60611 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Satb1Q60611 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Satb1Q60611 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.29■□□□□ 0.04
Satb1Q60611 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.29■□□□□ 0.04
Satb1Q60611 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Satb1Q60611 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Satb1Q60611 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Satb1Q60611 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Satb1Q60611 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Satb1Q60611 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.28■□□□□ 0.04
Satb1Q60611 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Satb1Q60611 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Satb1Q60611 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.28■□□□□ 0.04
Satb1Q60611 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.28■□□□□ 0.04
Satb1Q60611 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.28■□□□□ 0.04
Satb1Q60611 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 Gm43630-201ENSMUST00000201550 776 ntBASIC15.28■□□□□ 0.04
Satb1Q60611 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Satb1Q60611 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Satb1Q60611 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Satb1Q60611 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Satb1Q60611 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.27■□□□□ 0.04
Satb1Q60611 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.27■□□□□ 0.04
Satb1Q60611 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Satb1Q60611 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Satb1Q60611 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.27■□□□□ 0.04
Satb1Q60611 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.27■□□□□ 0.04
Satb1Q60611 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.27■□□□□ 0.04
Satb1Q60611 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Gm9824-201ENSMUST00000178707 561 ntBASIC15.27■□□□□ 0.04
Satb1Q60611 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Satb1Q60611 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.27■□□□□ 0.04
Satb1Q60611 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.27■□□□□ 0.04
Satb1Q60611 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Satb1Q60611 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Satb1Q60611 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.27■□□□□ 0.03
Satb1Q60611 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Satb1Q60611 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Satb1Q60611 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Satb1Q60611 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Satb1Q60611 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Satb1Q60611 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Satb1Q60611 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.26■□□□□ 0.03
Satb1Q60611 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.26■□□□□ 0.03
Satb1Q60611 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms