Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm4459-201ENSMUST00000118750 468 ntBASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm25745-201ENSMUST00000174945 133 ntBASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav15-1-dv6-1Q5R1D2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms