Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Gm16198-201ENSMUST00000118766 670 ntBASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Gm16026-204ENSMUST00000162652 683 ntBASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Gm5364-201ENSMUST00000216789 889 ntBASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf20Q5DTM8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Gm9727-201ENSMUST00000161387 555 ntBASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf20Q5DTM8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Gm8749-201ENSMUST00000117737 331 ntBASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Gm13464-201ENSMUST00000119418 935 ntBASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf20Q5DTM8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf20Q5DTM8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms