Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.68■□□□□ 0.1
Syne3Q4FZC9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Celf4-206ENSMUST00000224553 1729 ntBASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syne3Q4FZC9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Gm15467-201ENSMUST00000120582 445 ntBASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.66■□□□□ 0.1
Syne3Q4FZC9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Gm8000-201ENSMUST00000188378 592 ntBASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.66■□□□□ 0.1
Syne3Q4FZC9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.65■□□□□ 0.1
Syne3Q4FZC9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syne3Q4FZC9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Syne3Q4FZC9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Syne3Q4FZC9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms