Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Gm7506-201ENSMUST00000207758 815 ntBASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa3Q3UPR0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa3Q3UPR0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa3Q3UPR0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms