Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Gm13365-201ENSMUST00000121188 973 ntBASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Gm5479-201ENSMUST00000160578 435 ntBASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.56□□□□□ -0.24
Nhlrc4Q3UP44 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Gm24513-201ENSMUST00000174964 138 ntBASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Gm27494-201ENSMUST00000184735 189 ntBASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Gm18057-201ENSMUST00000208220 503 ntBASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nhlrc4Q3UP44 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Gm27397-201ENSMUST00000184997 107 ntBASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlrc4Q3UP44 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.53□□□□□ -0.24
Nhlrc4Q3UP44 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms