Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Gm8344-201ENSMUST00000119813 856 ntBASIC12.61□□□□□ -0.39
Fndc4Q3TR08 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fndc4Q3TR08 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Gm14722-201ENSMUST00000118943 689 ntBASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fndc4Q3TR08 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Fndc4Q3TR08 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms