Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Q3KNL4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Q3KNL4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Q3KNL4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Q3KNL4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Q3KNL4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Q3KNL4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Q3KNL4 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.52□□□□□ -0.08
Q3KNL4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Q3KNL4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Q3KNL4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Q3KNL4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Q3KNL4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.52□□□□□ -0.08
Q3KNL4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Q3KNL4 Gm9103-201ENSMUST00000119371 405 ntBASIC14.52□□□□□ -0.09
Q3KNL4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Q3KNL4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Q3KNL4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.52□□□□□ -0.09
Q3KNL4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Q3KNL4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.52□□□□□ -0.09
Q3KNL4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Q3KNL4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Q3KNL4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Q3KNL4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Q3KNL4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Q3KNL4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Q3KNL4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Q3KNL4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Q3KNL4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Q3KNL4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Q3KNL4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Q3KNL4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Q3KNL4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.51□□□□□ -0.09
Q3KNL4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Gm15173-201ENSMUST00000122049 433 ntBASIC14.51□□□□□ -0.09
Q3KNL4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Q3KNL4 Gm27459-201ENSMUST00000184860 107 ntBASIC14.51□□□□□ -0.09
Q3KNL4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Birc2-201ENSMUST00000054878 378 ntBASIC14.51□□□□□ -0.09
Q3KNL4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Q3KNL4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.51□□□□□ -0.09
Q3KNL4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Q3KNL4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Q3KNL4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Q3KNL4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Q3KNL4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.5□□□□□ -0.09
Q3KNL4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms