Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Gm5778-201ENSMUST00000171003 1072 ntBASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 AC140375.1-201ENSMUST00000225421 694 ntBASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Gm28450-201ENSMUST00000187349 638 ntBASIC7.67□□□□□ -1.18
Ush2AQ2QI47 AC154806.6-201ENSMUST00000228192 202 ntBASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Gm13369-201ENSMUST00000119442 987 ntBASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Gm44136-201ENSMUST00000203819 1106 ntBASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Gm6458-201ENSMUST00000211573 635 ntBASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Arhgef33-210ENSMUST00000225548 456 ntBASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Gm8325-201ENSMUST00000099086 453 ntBASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Gm11591-201ENSMUST00000120063 702 ntBASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Gm8768-201ENSMUST00000220020 826 ntBASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Gm11841-201ENSMUST00000117060 1963 ntBASIC7.66□□□□□ -1.18
Ush2AQ2QI47 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ush2AQ2QI47 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms