Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.51□□□□□ -0.09
Sox4Q06831 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Sox4Q06831 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.51□□□□□ -0.09
Sox4Q06831 Gm13464-201ENSMUST00000119418 935 ntBASIC14.51□□□□□ -0.09
Sox4Q06831 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.51□□□□□ -0.09
Sox4Q06831 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox4Q06831 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox4Q06831 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.51□□□□□ -0.09
Sox4Q06831 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sox4Q06831 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sox4Q06831 Efs-202ENSMUST00000227037 2540 ntBASIC14.51□□□□□ -0.09
Sox4Q06831 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox4Q06831 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox4Q06831 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox4Q06831 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.5□□□□□ -0.09
Sox4Q06831 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sox4Q06831 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Sox4Q06831 Gm11543-201ENSMUST00000120758 370 ntBASIC14.5□□□□□ -0.09
Sox4Q06831 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Mir6990-201ENSMUST00000183724 91 ntBASIC14.5□□□□□ -0.09
Sox4Q06831 Gm27920-201ENSMUST00000183953 96 ntBASIC14.5□□□□□ -0.09
Sox4Q06831 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Sox4Q06831 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.5□□□□□ -0.09
Sox4Q06831 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sox4Q06831 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sox4Q06831 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox4Q06831 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox4Q06831 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sox4Q06831 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.49□□□□□ -0.09
Sox4Q06831 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sox4Q06831 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox4Q06831 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.49□□□□□ -0.09
Sox4Q06831 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.49□□□□□ -0.09
Sox4Q06831 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.49□□□□□ -0.09
Sox4Q06831 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.49□□□□□ -0.09
Sox4Q06831 Gm43125-201ENSMUST00000201724 730 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms