Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col10a1Q05306 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col10a1Q05306 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col10a1Q05306 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col10a1Q05306 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col10a1Q05306 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.62□□□□□ -0.23
Col10a1Q05306 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col10a1Q05306 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col10a1Q05306 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col10a1Q05306 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col10a1Q05306 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col10a1Q05306 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.61□□□□□ -0.23
Col10a1Q05306 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.61□□□□□ -0.23
Col10a1Q05306 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.61□□□□□ -0.23
Col10a1Q05306 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.61□□□□□ -0.23
Col10a1Q05306 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col10a1Q05306 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.61□□□□□ -0.23
Col10a1Q05306 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Col10a1Q05306 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col10a1Q05306 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.6□□□□□ -0.23
Col10a1Q05306 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.6□□□□□ -0.23
Col10a1Q05306 Rpph1-201ENSMUST00000175096 319 ntBASIC13.6□□□□□ -0.23
Col10a1Q05306 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col10a1Q05306 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.6□□□□□ -0.23
Col10a1Q05306 Gm2213-201ENSMUST00000197485 688 ntBASIC13.6□□□□□ -0.23
Col10a1Q05306 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col10a1Q05306 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.6□□□□□ -0.23
Col10a1Q05306 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col10a1Q05306 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col10a1Q05306 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Col10a1Q05306 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col10a1Q05306 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.59□□□□□ -0.23
Col10a1Q05306 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms