Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Nkx3-2P97503 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.96□□□□□ -0.17
Nkx3-2P97503 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nkx3-2P97503 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.96□□□□□ -0.18
Nkx3-2P97503 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Nkx3-2P97503 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx3-2P97503 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx3-2P97503 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx3-2P97503 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx3-2P97503 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.96□□□□□ -0.18
Nkx3-2P97503 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Nkx3-2P97503 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Gm25287-201ENSMUST00000103846 110 ntBASIC13.95□□□□□ -0.18
Nkx3-2P97503 Gm22918-201ENSMUST00000103855 110 ntBASIC13.95□□□□□ -0.18
Nkx3-2P97503 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Gm18737-201ENSMUST00000173594 937 ntBASIC13.95□□□□□ -0.18
Nkx3-2P97503 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.95□□□□□ -0.18
Nkx3-2P97503 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.95□□□□□ -0.18
Nkx3-2P97503 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 BC037039-201ENSMUST00000192003 2205 ntBASIC13.95□□□□□ -0.18
Nkx3-2P97503 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx3-2P97503 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.94□□□□□ -0.18
Nkx3-2P97503 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.94□□□□□ -0.18
Nkx3-2P97503 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx3-2P97503 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx3-2P97503 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms