Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Npas1P97459 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.4□□□□□ -0.42
Npas1P97459 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Npas1P97459 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Npas1P97459 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.4□□□□□ -0.42
Npas1P97459 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.4□□□□□ -0.42
Npas1P97459 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.4□□□□□ -0.42
Npas1P97459 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Acot6-202ENSMUST00000222921 3622 ntBASIC12.4□□□□□ -0.42
Npas1P97459 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Npas1P97459 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Npas1P97459 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.4□□□□□ -0.42
Npas1P97459 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Npas1P97459 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Npas1P97459 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Npas1P97459 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Npas1P97459 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Npas1P97459 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Npas1P97459 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Npas1P97459 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.39□□□□□ -0.43
Npas1P97459 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Gm6433-201ENSMUST00000118634 875 ntBASIC12.39□□□□□ -0.43
Npas1P97459 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.39□□□□□ -0.43
Npas1P97459 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.39□□□□□ -0.43
Npas1P97459 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.39□□□□□ -0.43
Npas1P97459 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Npas1P97459 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.39□□□□□ -0.43
Npas1P97459 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.39□□□□□ -0.43
Npas1P97459 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npas1P97459 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Npas1P97459 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Npas1P97459 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Npas1P97459 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.38□□□□□ -0.43
Npas1P97459 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.38□□□□□ -0.43
Npas1P97459 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.38□□□□□ -0.43
Npas1P97459 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.38□□□□□ -0.43
Npas1P97459 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Npas1P97459 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Npas1P97459 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npas1P97459 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Npas1P97459 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms