Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.46■□□□□ 0.55
Nkx2-3P97334 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.46■□□□□ 0.55
Nkx2-3P97334 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Nkx2-3P97334 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.45■□□□□ 0.54
Nkx2-3P97334 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.45■□□□□ 0.54
Nkx2-3P97334 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Efs-202ENSMUST00000227037 2540 ntBASIC18.45■□□□□ 0.54
Nkx2-3P97334 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-3P97334 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.44■□□□□ 0.54
Nkx2-3P97334 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-3P97334 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Gm28760-201ENSMUST00000185995 736 ntBASIC18.43■□□□□ 0.54
Nkx2-3P97334 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.43■□□□□ 0.54
Nkx2-3P97334 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-3P97334 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.42■□□□□ 0.54
Nkx2-3P97334 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-3P97334 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.42■□□□□ 0.54
Nkx2-3P97334 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms