Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rad50P70388 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rad50P70388 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rad50P70388 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.69■□□□□ 0.42
Rad50P70388 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rad50P70388 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.69■□□□□ 0.42
Rad50P70388 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rad50P70388 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.69■□□□□ 0.42
Rad50P70388 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rad50P70388 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Rad50P70388 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.69■□□□□ 0.42
Rad50P70388 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.69■□□□□ 0.42
Rad50P70388 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rad50P70388 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.69■□□□□ 0.42
Rad50P70388 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad50P70388 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rad50P70388 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Rad50P70388 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.68■□□□□ 0.42
Rad50P70388 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rad50P70388 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rad50P70388 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.68■□□□□ 0.42
Rad50P70388 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.68■□□□□ 0.42
Rad50P70388 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.68■□□□□ 0.42
Rad50P70388 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.68■□□□□ 0.42
Rad50P70388 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rad50P70388 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad50P70388 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rad50P70388 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.67■□□□□ 0.42
Rad50P70388 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Gm16198-201ENSMUST00000118766 670 ntBASIC17.67■□□□□ 0.42
Rad50P70388 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
Rad50P70388 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.67■□□□□ 0.42
Rad50P70388 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.67■□□□□ 0.42
Rad50P70388 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Rad50P70388 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Rad50P70388 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rad50P70388 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad50P70388 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rad50P70388 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.66■□□□□ 0.42
Rad50P70388 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad50P70388 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad50P70388 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rad50P70388 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rad50P70388 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad50P70388 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad50P70388 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad50P70388 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad50P70388 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.66■□□□□ 0.42
Rad50P70388 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.66■□□□□ 0.42
Rad50P70388 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.66■□□□□ 0.42
Rad50P70388 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rad50P70388 Gm2272-201ENSMUST00000194903 582 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms