Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sf3b6P59708 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.11□□□□□ -0.31
Sf3b6P59708 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sf3b6P59708 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sf3b6P59708 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.1□□□□□ -0.31
Sf3b6P59708 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.1□□□□□ -0.31
Sf3b6P59708 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.1□□□□□ -0.31
Sf3b6P59708 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.1□□□□□ -0.31
Sf3b6P59708 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.1□□□□□ -0.31
Sf3b6P59708 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sf3b6P59708 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.09□□□□□ -0.31
Sf3b6P59708 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Sf3b6P59708 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sf3b6P59708 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.09□□□□□ -0.31
Sf3b6P59708 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Sf3b6P59708 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Sf3b6P59708 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Sf3b6P59708 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Gm17971-201ENSMUST00000190239 806 ntBASIC13.09□□□□□ -0.31
Sf3b6P59708 Gm7506-201ENSMUST00000207758 815 ntBASIC13.09□□□□□ -0.31
Sf3b6P59708 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.09□□□□□ -0.31
Sf3b6P59708 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.09□□□□□ -0.31
Sf3b6P59708 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sf3b6P59708 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sf3b6P59708 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Sf3b6P59708 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sf3b6P59708 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sf3b6P59708 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sf3b6P59708 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sf3b6P59708 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 Gm7153-201ENSMUST00000117092 455 ntBASIC13.08□□□□□ -0.32
Sf3b6P59708 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.08□□□□□ -0.32
Sf3b6P59708 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sf3b6P59708 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sf3b6P59708 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.08□□□□□ -0.32
Sf3b6P59708 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Sf3b6P59708 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms