Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atxn1P54254 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Atxn1P54254 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.67□□□□□ -0.06
Atxn1P54254 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atxn1P54254 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Atxn1P54254 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atxn1P54254 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atxn1P54254 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.66□□□□□ -0.06
Atxn1P54254 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.66□□□□□ -0.06
Atxn1P54254 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Asic1-205ENSMUST00000228185 1818 ntBASIC14.66□□□□□ -0.06
Atxn1P54254 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.66□□□□□ -0.06
Atxn1P54254 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Atxn1P54254 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.66□□□□□ -0.06
Atxn1P54254 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Atxn1P54254 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Atxn1P54254 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.66□□□□□ -0.06
Atxn1P54254 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.66□□□□□ -0.06
Atxn1P54254 Gm8515-201ENSMUST00000194852 576 ntBASIC14.66□□□□□ -0.06
Atxn1P54254 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.66□□□□□ -0.06
Atxn1P54254 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.66□□□□□ -0.06
Atxn1P54254 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atxn1P54254 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atxn1P54254 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atxn1P54254 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Atxn1P54254 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atxn1P54254 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atxn1P54254 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Atxn1P54254 Gm15321-201ENSMUST00000121290 288 ntBASIC14.65□□□□□ -0.06
Atxn1P54254 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Atxn1P54254 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atxn1P54254 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atxn1P54254 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.65□□□□□ -0.06
Atxn1P54254 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Atxn1P54254 Gm29541-201ENSMUST00000191351 678 ntBASIC14.65□□□□□ -0.06
Atxn1P54254 Gm43630-201ENSMUST00000201550 776 ntBASIC14.65□□□□□ -0.06
Atxn1P54254 Gm7775-201ENSMUST00000218871 853 ntBASIC14.65□□□□□ -0.06
Atxn1P54254 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Atxn1P54254 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Atxn1P54254 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atxn1P54254 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Atxn1P54254 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atxn1P54254 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atxn1P54254 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Atxn1P54254 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Atxn1P54254 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Atxn1P54254 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Atxn1P54254 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Atxn1P54254 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Gm13829-201ENSMUST00000119600 138 ntBASIC14.64□□□□□ -0.07
Atxn1P54254 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.64□□□□□ -0.07
Atxn1P54254 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.64□□□□□ -0.07
Atxn1P54254 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.64□□□□□ -0.07
Atxn1P54254 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.64□□□□□ -0.07
Atxn1P54254 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Atxn1P54254 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Atxn1P54254 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Atxn1P54254 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Atxn1P54254 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms