Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Lhx3P50481 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.94□□□□□ -0.02
Lhx3P50481 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Lhx3P50481 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.94□□□□□ -0.02
Lhx3P50481 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 Gm24158-201ENSMUST00000175263 71 ntBASIC14.94□□□□□ -0.02
Lhx3P50481 Gm10253-201ENSMUST00000194270 940 ntBASIC14.94□□□□□ -0.02
Lhx3P50481 Gm7774-201ENSMUST00000200064 533 ntBASIC14.94□□□□□ -0.02
Lhx3P50481 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.94□□□□□ -0.02
Lhx3P50481 Gm9182-201ENSMUST00000217829 639 ntBASIC14.94□□□□□ -0.02
Lhx3P50481 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.94□□□□□ -0.02
Lhx3P50481 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.94□□□□□ -0.02
Lhx3P50481 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Lhx3P50481 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.94□□□□□ -0.02
Lhx3P50481 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.94□□□□□ -0.02
Lhx3P50481 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx3P50481 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Lhx3P50481 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.93□□□□□ -0.02
Lhx3P50481 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
Lhx3P50481 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Lhx3P50481 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Lhx3P50481 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Lhx3P50481 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.93□□□□□ -0.02
Lhx3P50481 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.93□□□□□ -0.02
Lhx3P50481 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.93□□□□□ -0.02
Lhx3P50481 Gm25948-201ENSMUST00000175334 112 ntBASIC14.93□□□□□ -0.02
Lhx3P50481 Gm9824-201ENSMUST00000178707 561 ntBASIC14.93□□□□□ -0.02
Lhx3P50481 Gm29541-201ENSMUST00000191351 678 ntBASIC14.93□□□□□ -0.02
Lhx3P50481 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Lhx3P50481 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.93□□□□□ -0.02
Lhx3P50481 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Lhx3P50481 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Lhx3P50481 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx3P50481 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.93□□□□□ -0.02
Lhx3P50481 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.93□□□□□ -0.02
Lhx3P50481 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Lhx3P50481 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Lhx3P50481 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.92□□□□□ -0.02
Lhx3P50481 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.92□□□□□ -0.02
Lhx3P50481 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.92□□□□□ -0.02
Lhx3P50481 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Lhx3P50481 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.92□□□□□ -0.02
Lhx3P50481 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Gm5779-201ENSMUST00000218467 910 ntBASIC14.92□□□□□ -0.02
Lhx3P50481 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx3P50481 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms