Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shmt1P50431 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shmt1P50431 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shmt1P50431 Gm22065-201ENSMUST00000103753 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm22066-201ENSMUST00000103761 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm24932-201ENSMUST00000103763 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm24115-201ENSMUST00000103799 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm22190-201ENSMUST00000103827 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm22191-201ENSMUST00000103831 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm24721-201ENSMUST00000103849 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm28018-201ENSMUST00000103869 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm26399-201ENSMUST00000103937 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.59■□□□□ 0.09
Shmt1P50431 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Shmt1P50431 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.59■□□□□ 0.09
Shmt1P50431 Gm5479-201ENSMUST00000160578 435 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.59■□□□□ 0.09
Shmt1P50431 Gm25349-201ENSMUST00000177728 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm23616-201ENSMUST00000177797 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm25871-201ENSMUST00000177816 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm24752-201ENSMUST00000178240 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm24496-201ENSMUST00000178287 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm25649-201ENSMUST00000178476 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm25548-201ENSMUST00000178681 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm23147-201ENSMUST00000178841 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm26095-201ENSMUST00000179270 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm22171-201ENSMUST00000179283 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm23936-201ENSMUST00000179354 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm22619-201ENSMUST00000179516 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm25255-201ENSMUST00000179579 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm24755-201ENSMUST00000179691 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm26506-201ENSMUST00000179692 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm25086-201ENSMUST00000179931 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm23243-201ENSMUST00000180047 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm24659-201ENSMUST00000180212 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm24169-201ENSMUST00000180244 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm23689-201ENSMUST00000180354 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.59■□□□□ 0.09
Shmt1P50431 Gm27359-201ENSMUST00000184153 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm27785-201ENSMUST00000184268 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm27466-201ENSMUST00000184396 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm27703-201ENSMUST00000184836 110 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.59■□□□□ 0.09
Shmt1P50431 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shmt1P50431 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shmt1P50431 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shmt1P50431 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shmt1P50431 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shmt1P50431 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shmt1P50431 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.59■□□□□ 0.09
Shmt1P50431 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shmt1P50431 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shmt1P50431 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.59■□□□□ 0.09
Shmt1P50431 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.59■□□□□ 0.09
Shmt1P50431 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Shmt1P50431 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.59■□□□□ 0.09
Shmt1P50431 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Shmt1P50431 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Shmt1P50431 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Shmt1P50431 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shmt1P50431 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shmt1P50431 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Shmt1P50431 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.58■□□□□ 0.08
Shmt1P50431 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.58■□□□□ 0.08
Shmt1P50431 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.58■□□□□ 0.08
Shmt1P50431 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shmt1P50431 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shmt1P50431 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.58■□□□□ 0.08
Shmt1P50431 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shmt1P50431 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shmt1P50431 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shmt1P50431 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.58■□□□□ 0.08
Shmt1P50431 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.58■□□□□ 0.08
Shmt1P50431 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shmt1P50431 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shmt1P50431 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shmt1P50431 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shmt1P50431 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shmt1P50431 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.57■□□□□ 0.08
Shmt1P50431 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Shmt1P50431 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.57■□□□□ 0.08
Shmt1P50431 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shmt1P50431 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shmt1P50431 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Shmt1P50431 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shmt1P50431 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shmt1P50431 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.57■□□□□ 0.08
Shmt1P50431 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shmt1P50431 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Shmt1P50431 Gm25287-201ENSMUST00000103846 110 ntBASIC15.57■□□□□ 0.08
Shmt1P50431 Gm22918-201ENSMUST00000103855 110 ntBASIC15.57■□□□□ 0.08
Shmt1P50431 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shmt1P50431 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.57■□□□□ 0.08
Shmt1P50431 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shmt1P50431 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shmt1P50431 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shmt1P50431 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shmt1P50431 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms