Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rph3aP47708 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.24□□□□□ -0.13
Rph3aP47708 Gm12260-201ENSMUST00000122447 411 ntBASIC14.24□□□□□ -0.13
Rph3aP47708 Gm43514-201ENSMUST00000198852 424 ntBASIC14.24□□□□□ -0.13
Rph3aP47708 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rph3aP47708 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rph3aP47708 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rph3aP47708 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rph3aP47708 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rph3aP47708 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.23□□□□□ -0.13
Rph3aP47708 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.23□□□□□ -0.13
Rph3aP47708 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.23□□□□□ -0.13
Rph3aP47708 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Mir8117-201ENSMUST00000184773 107 ntBASIC14.23□□□□□ -0.13
Rph3aP47708 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.23□□□□□ -0.13
Rph3aP47708 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.23□□□□□ -0.13
Rph3aP47708 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.23□□□□□ -0.13
Rph3aP47708 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Rph3aP47708 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rph3aP47708 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.22□□□□□ -0.13
Rph3aP47708 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rph3aP47708 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Rph3aP47708 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rph3aP47708 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rph3aP47708 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.22□□□□□ -0.13
Rph3aP47708 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Rph3aP47708 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Rph3aP47708 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.22□□□□□ -0.13
Rph3aP47708 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.22□□□□□ -0.13
Rph3aP47708 Gm5177-201ENSMUST00000183092 997 ntBASIC14.22□□□□□ -0.13
Rph3aP47708 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.22□□□□□ -0.13
Rph3aP47708 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.22□□□□□ -0.13
Rph3aP47708 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.22□□□□□ -0.13
Rph3aP47708 Thap2-203ENSMUST00000218989 527 ntBASIC14.22□□□□□ -0.13
Rph3aP47708 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.22□□□□□ -0.13
Rph3aP47708 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rph3aP47708 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms