Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.26□□□□□ -0.13
Tnfsf4P43488 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Birc2-201ENSMUST00000054878 378 ntBASIC14.26□□□□□ -0.13
Tnfsf4P43488 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Gm11764-201ENSMUST00000120221 623 ntBASIC14.25□□□□□ -0.13
Tnfsf4P43488 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.25□□□□□ -0.13
Tnfsf4P43488 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Gm34391-201ENSMUST00000203706 907 ntBASIC14.25□□□□□ -0.13
Tnfsf4P43488 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.25□□□□□ -0.13
Tnfsf4P43488 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfsf4P43488 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Gm27459-201ENSMUST00000184860 107 ntBASIC14.24□□□□□ -0.13
Tnfsf4P43488 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tnfsf4P43488 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.23□□□□□ -0.13
Tnfsf4P43488 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tnfsf4P43488 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms