Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Mmp13P33435 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Mmp13P33435 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Mmp13P33435 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Mmp13P33435 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Mmp13P33435 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Mmp13P33435 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Mmp13P33435 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Gm11764-201ENSMUST00000120221 623 ntBASIC15.12■□□□□ 0.01
Mmp13P33435 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.12■□□□□ 0.01
Mmp13P33435 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.12■□□□□ 0.01
Mmp13P33435 Gm27628-201ENSMUST00000184911 107 ntBASIC15.12■□□□□ 0.01
Mmp13P33435 Gm5364-201ENSMUST00000216789 889 ntBASIC15.12■□□□□ 0.01
Mmp13P33435 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.12■□□□□ 0.01
Mmp13P33435 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Mmp13P33435 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.12■□□□□ 0.01
Mmp13P33435 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.12■□□□□ 0.01
Mmp13P33435 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp13P33435 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Gm5682-201ENSMUST00000173402 505 ntBASIC15.11■□□□□ 0.01
Mmp13P33435 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.11■□□□□ 0.01
Mmp13P33435 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.11■□□□□ 0.01
Mmp13P33435 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Mmp13P33435 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.11■□□□□ 0.01
Mmp13P33435 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.11■□□□□ 0.01
Mmp13P33435 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Mmp13P33435 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp13P33435 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Mmp13P33435 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Mmp13P33435 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.1■□□□□ 0.01
Mmp13P33435 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Mmp13P33435 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mmp13P33435 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mmp13P33435 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mmp13P33435 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mmp13P33435 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mmp13P33435 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Mmp13P33435 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.09■□□□□ 0.01
Mmp13P33435 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.09■□□□□ 0.01
Mmp13P33435 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mmp13P33435 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.09■□□□□ 0.01
Mmp13P33435 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mmp13P33435 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.09■□□□□ 0.01
Mmp13P33435 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mmp13P33435 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.09■□□□□ 0.01
Mmp13P33435 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mmp13P33435 Gm43767-201ENSMUST00000198933 381 ntBASIC15.09■□□□□ 0.01
Mmp13P33435 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.09■□□□□ 0.01
Mmp13P33435 Gm7787-201ENSMUST00000216858 688 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms