Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.68□□□□□ -0.06
Nckap1P28660 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nckap1P28660 Gm27618-201ENSMUST00000183671 60 ntBASIC14.68□□□□□ -0.06
Nckap1P28660 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.68□□□□□ -0.06
Nckap1P28660 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.68□□□□□ -0.06
Nckap1P28660 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nckap1P28660 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nckap1P28660 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.68□□□□□ -0.06
Nckap1P28660 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.68□□□□□ -0.06
Nckap1P28660 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nckap1P28660 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Nckap1P28660 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nckap1P28660 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Nckap1P28660 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.67□□□□□ -0.06
Nckap1P28660 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.67□□□□□ -0.06
Nckap1P28660 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.67□□□□□ -0.06
Nckap1P28660 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.67□□□□□ -0.06
Nckap1P28660 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.67□□□□□ -0.06
Nckap1P28660 Gm25144-201ENSMUST00000179561 110 ntBASIC14.67□□□□□ -0.06
Nckap1P28660 Gm25352-201ENSMUST00000179815 110 ntBASIC14.67□□□□□ -0.06
Nckap1P28660 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.67□□□□□ -0.06
Nckap1P28660 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.67□□□□□ -0.06
Nckap1P28660 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Nckap1P28660 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nckap1P28660 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.67□□□□□ -0.06
Nckap1P28660 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nckap1P28660 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.67□□□□□ -0.06
Nckap1P28660 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nckap1P28660 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Nckap1P28660 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.66□□□□□ -0.06
Nckap1P28660 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Nckap1P28660 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nckap1P28660 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nckap1P28660 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.66□□□□□ -0.06
Nckap1P28660 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Gm13453-201ENSMUST00000118708 357 ntBASIC14.66□□□□□ -0.06
Nckap1P28660 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Mir6977-201ENSMUST00000184960 64 ntBASIC14.66□□□□□ -0.06
Nckap1P28660 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Nckap1P28660 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Nckap1P28660 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nckap1P28660 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.66□□□□□ -0.06
Nckap1P28660 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nckap1P28660 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms